| Ziegler MJ, Babcock HH, Welbel SF, Warren DK, Trick WE, Tolomeo P, Omorogbe J, Garcia D, Habrock-Bach T, Donceras O, Gaynes S, Cressman L, Burnham JP, Bilker W, Reddy SC, Pegues D, Lautenbach E, Kelly BJ, Fuchs B, Martin ND, Han JH, CDC Prevention Epicenters Program |
Stopping Hospital Infections with Environmental Services (SHINE): A Cluster-Randomized Trial of Intensive Monitoring Methods for Terminal Room Cleaning on Rates of Multidrug-Resistant Organisms in the Intensive Care Unit |
Clin Infect Dis |
http://dx.doi.org/10.1093/cid/ciac070 |
2022 |
| Zhang HL, Kelly BJ, David MZ, Lautenbach E, Huang E, Bekele S, Tolomeo P, Reesey E, Loughrey S, Pegues D, Ziegler MJ, CDC Prevention Epicenters Program |
SARS-CoV-2 RNA persists on surfaces following terminal disinfection of COVID-19 hospital isolation rooms |
Am J Infect Control |
http://dx.doi.org/10.1016/j.ajic.2022.01.014 |
2022 |
| Marques Andrew D., Sherrill-Mix Scott, Everett John K., Reddy Shantan, Hokama Pascha, Roche Aoife M., Hwang Young, Glascock Abigail, Whiteside Samantha A., Graham-Wooten Jevon, Khatib Layla A., Fitzgerald Ayannah S., Moustafa Ahmed M., Bianco Colleen, Rajagopal Swetha, Helton Jenna, Deming Regan, Denu Lidiya, Ahmed Azad, Kitt Eimear, Coffin Susan E., Newbern Claire, Mell Josh Chang, Planet Paul J., Badjatia Nitika, Richards Bonnie, Wang Zi-Xuan, Cannuscio Carolyn C., Strelau Katherine M., Jaskowiak-Barr Anne, Cressman Leigh, Loughrey Sean, Ganguly Arupa, Feldman Michael D., Collman Ronald G., Rodino Kyle G., Kelly Brendan J., Bushman Frederic D., Goff Stephen P |
SARS-CoV-2 Variants Associated with Vaccine Breakthrough in the Delaware Valley through Summer 2021 |
MBio |
https://doi.org/10.1128/mbio.03788-21 |
2022 |
| Ziegler MJ, Huang E, Bekele S, Reesey E, Tolomeo P, Loughrey S, David MZ, Lautenbach E, Kelly BJ, CDC Prevention Epicenters Program |
Spatial and temporal effects on SARS-CoV-2 contamination of the healthcare environment |
Infect Control Hosp Epidemiol |
http://dx.doi.org/10.1017/ice.2021.530 |
2021 |
| Ziegler MJ, Huang E, Bekele S, Reesey E, Tolomeo P, Loughrey S, David MZ, Lautenbach E, Kelly BJ, CDC Prevention Epicenters Program |
Spatial and temporal effects on severe acute respiratory coronavirus virus 2 (SARS-CoV-2) contamination of the healthcare environment |
Infect Control Hosp Epidemiol |
http://dx.doi.org/10.1017/ice.2021.530 |
2021 |
| Marques AD, Sherrill-Mix S, Everett J, Reddy S, Hokama P, Roche AM, Hwang Y, Glascock A, Whiteside SA, Graham-Wooten J, Khatib LA, Fitzgerald AS, Moustafa AM, Bianco C, Rajagopal S, Helton J, Deming R, Denu L, Ahmed A, Kitt E, Coffin SE, Newbern C, Mell JC, Planet PJ, Badjatia N, Richards B, Wang Z-X, Cannuscio CC, Strelau KM, Jaskowiak-Barr A, Cressman L, Loughrey S, Ganguly A, Feldman MD, Collman RG, Rodino KG, Kelly BJ, Bushman FD |
SARS-CoV-2 variants associated with vaccine breakthrough in the Delaware Valley through summer 2021 |
medRxiv |
http://dx.doi.org/10.1101/2021.10.18.21264623 |
2021 |
| Zhang HL, Kelly BJ, David MZ, Lautenbach E, Huang E, Bekele S, Tolomeo P, Reesey E, Loughrey S, Pegues D, Ziegler MJ, CDC Prevention Epicenters Program |
Severe acute respiratory coronavirus virus 2 (SARS-CoV-2) surface contamination in staff common areas and impact on healthcare worker infection: Prospective surveillance during the coronavirus disease 2019 (COVID-19) pandemic |
Infect Control Hosp Epidemiol |
http://dx.doi.org/10.1017/ice.2021.468 |
2021 |
| Rhee RL, Lu J, Bittinger K, Lee J-J, Mattei LM, Sreih AG, Chou S, Miner JJ, Cohen NA, Kelly BJ, Lee H, Grayson PC, Collman RG, Merkel PA |
Dynamic Changes in the Nasal Microbiome Associated With Disease Activity in Patients With Granulomatosis With Polyangiitis |
Arthritis Rheumatol |
http://dx.doi.org/10.1002/art.41723 |
2021 |
| Kelly BJ, Bekele S, Loughrey S, Huang E, Tolomeo P, David MZ, Lautenbach E, Han JH, Ziegler MJ, CDC Prevention Epicenters Program |
Healthcare microenvironments define multidrug-resistant organism persistence |
Infect Control Hosp Epidemiol |
http://dx.doi.org/10.1017/ice.2021.323 |
2021 |
| Harrigan JJ, Abdallah H, Clarke EL, Oganisian A, Roy JA, Lautenbach E, Reesey E, Wernovsky M, Tolomeo P, Morawski Z, Jacob J, Grippi MA, Kelly BJ |
Respiratory microbiome disruption and risk for ventilator-associated lower respiratory tract infection |
Clin Infect Dis |
http://dx.doi.org/10.1093/cid/ciab678 |
2021 |
| Abdallah HO, Weingart MF, Fuller R, Pegues D, Fitzpatrick R, Kelly BJ |
Subglottic suction frequency and adverse ventilator-associated events during critical illness |
Infect Control Hosp Epidemiol |
http://dx.doi.org/10.1017/ice.2020.1298 |
2021 |
| Richard-Greenblatt M, Ziegler MJ, Bromberg V, Huang E, Abdallah H, Tolomeo P, Lautenbach E, Glaser L, Kelly BJ |
Quantifying the Impact of Nasopharyngeal Specimen Quality on Severe Acute Respiratory Syndrome Coronavirus 2 Test Performance |
Open Forum Infect Dis |
http://dx.doi.org/10.1093/ofid/ofab235 |
2021 |
| Richard-Greenblatt M, Ziegler MJ, Bromberg V, Huang E, Abdallah H, Tolomeo P, Lautenbach E, Glaser L, Kelly BJ |
Impact of Nasopharyngeal Specimen Quality on SARS-CoV-2 Test Sensitivity |
medRxiv |
http://dx.doi.org/10.1101/2020.12.09.20246520 |
2020 |
| Redding LE, Kelly BJ, Stefanovski D, Lautenbach JK, Tolomeo P, Cressman L, Gruber E, Meily P, Lautenbach E |
Pet Ownership Protects Against Recurrence of Clostridioides difficile Infection |
Open Forum Infect Dis |
http://dx.doi.org/10.1093/ofid/ofz541 |
2020 |
| Berry ASF, Kelly BJ, Barnhart D, Kelly DJ, Beiting DP, Baldassano RN, Redding LE |
Gut microbiota features associated with Clostridioides difficile colonization in puppies |
PLoS One |
http://dx.doi.org/10.1371/journal.pone.0215497 |
2019 |
| Ziegler M, Han JH, Landsburg D, Pegues D, Reesey E, Gilmar C, Gorman T, Bink K, Moore A, Kelly BJ, CDC Prevention Epicenters Program |
Impact of Levofloxacin for the Prophylaxis of Bloodstream Infection on the Gut Microbiome in Patients With Hematologic Malignancy |
Open Forum Infect Dis |
http://dx.doi.org/10.1093/ofid/ofz252 |
2019 |
| Knecht VR, McGinniss JE, Shankar HM, Clarke EL, Kelly BJ, Imai I, Fitzgerald AS, Bittinger K, Bushman FD, Collman RG |
Molecular analysis of bacterial contamination on stethoscopes in an intensive care unit |
Infect Control Hosp Epidemiol |
http://dx.doi.org/10.1017/ice.2018.319 |
2019 |
| Kelly BJ, Lautenbach E, Nachamkin I, Coffin SE, Gerber JS, Fuchs BD, Garrigan C, Han X, Bilker WB, Wise J, Tolomeo P, Han JH, Centers for Disease Control and Prevention (CDC) Prevention Epicenters Program |
Combined Biomarkers Predict Acute Mortality Among Critically Ill Patients With Suspected Sepsis |
Crit Care Med |
http://dx.doi.org/10.1097/CCM.0000000000003137 |
2018 |
| Agarwal R, Bartsch SM, Kelly BJ, Prewitt M, Liu Y, Chen Y, Umscheid CA |
Newer glycopeptide antibiotics for treatment of complicated skin and soft tissue infections: systematic review, network meta-analysis and cost analysis |
Clin Microbiol Infect |
http://dx.doi.org/10.1016/j.cmi.2017.08.028 |
2018 |
| Kelly BJ, Tebas P |
Clinical Practice and Infrastructure Review of Fecal Microbiota Transplantation for Clostridium difficile Infection |
Chest |
http://dx.doi.org/10.1016/j.chest.2017.09.002 |
2018 |
| Kelly BJ, Lautenbach E, Nachamkin I, Coffin SE, Gerber JS, Fuchs BD, Garrigan C, Han X, Bilker WB, Wise J, Tolomeo P, Han JH, Centers for Disease Control and Prevention (CDC) Prevention Epicenters Program |
Combined biomarkers discriminate a low likelihood of bacterial infection among surgical intensive care unit patients with suspected sepsis |
Diagn Microbiol Infect Dis |
http://dx.doi.org/10.1016/j.diagmicrobio.2016.01.003 |
2016 |
| Kelly BJ, Imai I, Bittinger K, Laughlin A, Fuchs BD, Bushman FD, Collman RG |
Composition and dynamics of the respiratory tract microbiome in intubated patients |
Microbiome |
http://dx.doi.org/10.1186/s40168-016-0151-8 |
2016 |
| Kelly BJ, Gross R, Bittinger K, Sherrill-Mix S, Lewis JD, Collman RG, Bushman FD, Li H |
Power and sample-size estimation for microbiome studies using pairwise distances and PERMANOVA |
Bioinformatics |
http://dx.doi.org/10.1093/bioinformatics/btv183 |
2015 |
| Brady T, Kelly BJ, Male F, Roth S, Bailey A, Malani N, Gijsbers R, O’Doherty U, Bushman FD |
Quantitation of HIV DNA integration: effects of differential integration site distributions on Alu-PCR assays |
J Virol Methods |
http://dx.doi.org/10.1016/j.jviromet.2013.01.004 |
2013 |
| Khiabanian H, Holmes AB, Kelly BJ, Gururaj M, Hripcsak G, Rabadan R |
Signs of the 2009 influenza pandemic in the New York-Presbyterian Hospital electronic health records |
PLoS One |
http://dx.doi.org/10.1371/journal.pone.0012658 |
2010 |
| Yu M, Kumar TRS, Nkrumah LJ, Coppi A, Retzlaff S, Li CD, Kelly BJ, Moura PA, Lakshmanan V, Freundlich JS, Valderramos J-C, Vilcheze C, Siedner M, Tsai JH-C, Falkard B, Sidhu ABS, Purcell LA, Gratraud P, Kremer L, Waters AP, Schiehser G, Jacobus DP, Janse CJ, Ager A, Jacobs WR Jr, Sacchettini JC, Heussler V, Sinnis P, Fidock DA |
The fatty acid biosynthesis enzyme FabI plays a key role in the development of liver-stage malarial parasites |
Cell Host Microbe |
http://dx.doi.org/10.1016/j.chom.2008.11.001 |
2008 |